Sylvain Bouix

Professeur

Department

Département de génie logiciel et des TI

Office

A-3414

sylvain.bouix@etsmtl.ca

Research axe

Health Technologies

Areas of expertise

Imagerie médicale
Neuroimagerie
Neuroinformatique
IRM anatomique et de diffusion

Course

3 credits Automne 2023

3 credits Hiver 2024

Supervision

En codirection avec : Ebrahimi-Kahou, Samira
Contrôle de qualité automatisé de l'imagerie par résonance magnétique (IRM) du cerveau humain par l'apprentissage profond, par Bricout,Charles
Été 2024

Publications

Brandee Feola, Adam Beermann, Karlos Manzanarez Felix, Michael Coleman, Sylvain Bouix, Daphne J. Holt, Kathryn E. Lewandowski, Dost Öngür, Alan Breier, Martha E. Shenton, Stephan Heckers, Roscoe O. Brady, Jennifer Urbano Blackford, Heather Burrell Ward. 2024 « Data-driven, connectome-wide analysis identifies psychosis-specific brain correlates of fear and anxiety ». Molecular Psychiatry
M. T. Ly, F. Tuz-Zahra, Y. Tripodis, C. H. Adler, L. J. Balcer, C. Bernick, H. Zetterberg, K. Blennow, E. R. Peskind, R. Au, S. J. Banks, W. B. Barr, J. V. Wethe, M. W. Bondi, L. M. Delano-Wood, R. C. Cantu, M. J. Coleman, D. W. Dodick, M. D. McClean, J. B. Mez, J. Palmisano, B. Martin, K. Hartlage, A. P. Lin, I. K. Koerte, J. L. Cummings, E. M. Reiman, M. E. Shenton, R. A. Stern, S. Bouix, M. L. Alosco. 2024 « Association of vascular risk factors and CSF and imaging biomarkers with white matter hyperintensities in former american football players ». Neurology vol. 102 , nº 2
P. V. Viher, J. Seitz-Holland, M. S. Schulz, E. A. Kensinger, S. Karmacharya, T. Swisher, A. E. Lyall, N. Makris, S. Bouix, M. E. Shenton, M. Kubicki, R. J. Waldinger. 2024 « More organized white matter is associated with positivity bias in older adults ». Brain Imaging and Behavior
M. L. Alosco, W. B. Barr, S. J. Banks, J. V. Wethe, J. B. Miller, S. V. Pulukuri, J. Culhane, Y. Tripodis, C. H. Adler, L. J. Balcer, C. Bernick, M. L. Mariani, R. C. Cantu, D. W. Dodick, M. D. McClean, R. Au, J. Mez, R. W. Turner, J. N. Palmisano, B. Martin, K. Hartlage, J. L. Cummings, E. M. Reiman, M. E. Shenton, R. A. Stern, Y. Su, K. Chen, H. Protas, C. Boker, L. Farrer, R. Helm, D. I. Katz, N. Kowall, G. Mercier, J. Otis, J. Weller, I. Simkin, A. Andino, S. Conneely, C. Diamond, T. Fagle, O. Haller, T. Hunt, N. Gullotti, B. Mayville, K. McLaughlin, M. Nanna, T. Platt, F. Rice, M. Sestak, D. Annis, C. Chaisson, D. B. Dixon, C. Finney, K. Gallagher, J. Lu, E. Ojo, B. Pine, J. Ramachandran, S. Bouix, J. Fitzsimmons, A. P. Lin, I. K. Koerte, O. Pasternak, H. Arciniega, T. Billah, E. Bonke, K. Breedlove, E. Coello, M. J. Coleman, L. Jung, H. Liao, M. Loy, E. Rizzoni, V. Schultz, A. Silva, B. Vessey, T. L. T. Wiegand, A. Ritter, M. Sabbagh, R. de la Cruz, J. Durant, M. Golceker, N. Harmon, K. Kaylegian, R. Long, C. Nance, P. Sandoval, K. L. Marek, A. Serrano, Y. Geda, B. Falk, A. Duffy, M. Howard, M. Montague, T. Osgood, D. Babcock, P. Bellgowan, J. Goldberg, T. Wisniewski. 2023 « Neuropsychological test performance of former American football players ». Alzheimer's Research and Therapy vol. 15 , nº 1
M. L. Alosco, Y. Tripodis, Z. H. Baucom, C. H. Adler, L. J. Balcer, C. Bernick, M. L. Mariani, R. Au, S. J. Banks, W. B. Barr, J. V. Wethe, R. C. Cantu, M. J. Coleman, D. W. Dodick, M. D. McClean, A. C. McKee, J. Mez, J. N. Palmisano, B. Martin, K. Hartlage, A. P. Lin, I. K. Koerte, J. L. Cummings, E. M. Reiman, R. A. Stern, M. E. Shenton, S. Bouix. 2023 « White matter hyperintensities in former American football players ». Alzheimer's and Dementia vol. 19 , nº 4. p. 1260-1273
Michael L. Alosco, Yi Su, Thor D. Stein, Hillary Protas, Jonathan D. Cherry, Charles H. Adler, Laura J. Balcer, Charles Bernick, Surya Vamsi Pulukuri, Bobak Abdolmohammadi, Michael J. Coleman, Joseph N. Palmisano, Yorghos Tripodis, Jesse Mez, Gil D. Rabinovici, Kenneth L. Marek, Thomas G. Beach, Keith A. Johnson, Bertrand Russell Huber, Inga Koerte, Alexander P. Lin, Sylvain Bouix, Jeffrey L. Cummings, Martha E. Shenton, Eric M. Reiman, Ann C. McKee, Robert A. Stern, Eric Reiman, Yi Su, Kewei Chen, Hillary Protas, Connie Boker, Michael L. Alosco, Rhoda Au, Robert C. Cantu, Lindsay Farrer, Robert Helm, Douglas I. Katz, Neil Kowall, Jesse Mez, Gustavo Mercier, James Otis, Robert A. Stern, Jason Weller, Irene Simkin, Alondra Andino, Shannon Conneely, Courtney Diamond, Tessa Fagle, Olivia Haller, Tennyson Hunt, Nicole Gullotti, Megan Mariani, Brian Mayville, Kathleen McLaughlin, Mary Nanna, Taylor Platt, Surya Pulukuri, Fiona Rice, Madison Sestak, Michael McClean, Yorghos Tripodis, Douglas Annis, Christine Chaisson, Diane B. Dixon, Carolyn Finney, Kerrin Gallagher, Kaitlin Hartlage, Jun Lu, Brett Martin, Emmanuel Ojo, Joseph N. Palmisano, Brittany Pine, Janani Ramachandran, Sylvain Bouix, Jennifer Fitzsimmons, Alexander P. Lin, Inga K. Koerte, Ofer Pasternak, Martha E. Shenton, Hector Arcinieago, Tashrif Billah, Elena Bonke, Katherine Breedlove, Eduardo Coello, Michael J. Coleman, Leonhard Jung, Huijun Liao, Maria Loy, Elizabeth Rizzoni, Vivian Schultz, Annelise Silva, Brynn Vessey, Tim L. T. Wiegand, Sarah Banks, Charles Bernick, Jason Miller, Aaron Ritter, Marwan Sabbagh, Raelynn de la Cruz. 2023 « Associations between near end-of-life flortaucipir PET and postmortem CTE-related tau neuropathology in six former American football players ». European Journal of Nuclear Medicine and Molecular Imaging vol. 50 , nº 2. p. 435-452
M. Geisler, F. de la Cruz, N. Makris, T. Billah, F. Zhang, Y. Rathi, L. J. O'Donnell, S. Bouix, M. Herbsleb, K. J. Bär, Z. Kikinis, T. Weiss. 2023 « Brains of endurance athletes differ in the association areas but not in the primary areas ». Psychophysiology
J. J. Levitt, F. Zhang, M. Vangel, P. G. Nestor, Y. Rathi, S. Cetin-Karayumak, M. Kubicki, M. J. Coleman, K. E. Lewandowski, D. J. Holt, M. Keshavan, S. Bouix, D. Öngür, A. Breier, M. E. Shenton, L. J. O’Donnell. 2023 « The organization of frontostriatal brain wiring in non-affective early psychosis compared with healthy subjects using a novel diffusion imaging fiber cluster analysis ». Molecular Psychiatry vol. 28 , nº 6. p. 2301-2311
Sofia Marcolini, Philine Rojczyk, Johanna Seitz-Holland, Inga K. Koerte, Michael L. Alosco, Sylvain Bouix. 2023 « Posttraumatic stress and traumatic brain injury: Cognition, behavior, and neuroimaging markers in Vietnam veterans ». Journal of Alzheimer's Disease vol. 95 , nº 4. p. 1427-1448
Lara Pankatz, Philine Rojczyk, Johanna Seitz-Holland, Sylvain Bouix, Leonard B. Jung, Tim L. T. Wiegand, Elena M. Bonke, Nico Sollmann, Elisabeth Kaufmann, Holly Carrington, Twishi Puri, Yogesh Rathi, Michael J. Coleman, Ofer Pasternak, Mark S. George, Thomas W. McAllister, Ross Zafonte, Murray B. Stein, Christine E. Marx, Martha E. Shenton, Inga K. Koerte. 2023 « Adverse outcome following mild traumatic brain injury is associated with microstructure alterations at the gray and white matter boundary ». Journal of Clinical Medicine vol. 12 , nº 16
P. Rojczyk, J. Seitz-Holland, E. Kaufmann, V. J. Sydnor, C. L. Kim, L. F. Umminger, T. L. T. Wiegand, J. P. Guenette, F. Zhang, Y. Rathi, S. Bouix, O. Pasternak, C. B. Fortier, D. Salat, S. R. Hinds, F. Heinen, L. J. O’Donnell, W. P. Milberg, R. E. McGlinchey, M. E. Shenton, I. K. Koerte. 2023 « Sleep quality disturbances are associated with white matter alterations in veterans with post-traumatic stress disorder and mild traumatic brain injury ». Journal of Clinical Medicine vol. 12 , nº 5
Takeshi Sasaki, Nikos Makris, Martha E. Shenton, Peter Savadjiev, Yogesh Rathi, Ryan Eckbo, Sylvain Bouix, Edward Yeterian, Bradford C. Dickerson, Marek Kubicki. 2023 « Structural connectivity of cytoarchitectonically distinct human left temporal pole subregions: a diffusion MRI tractography study ». Frontiers in Neuroanatomy vol. 17
L. F. Umminger, P. Rojczyk, J. Seitz-Holland, N. Sollmann, E. Kaufmann, P. Kinzel, F. Zhang, J. Kochsiek, M. Langhein, C. L. Kim, T. L. T. Wiegand, J. D. Kilts, J. C. Naylor, G. A. Grant, Y. Rathi, M. J. Coleman, S. Bouix, Y. Tripodis, O. Pasternak, M. S. George, T. W. McAllister, R. Zafonte, M. B. Stein, L. J. O'Donnell, C. E. Marx, M. E. Shenton, I. K. Koerte. 2023 « White matter microstructure is associated with serum neuroactive steroids and psychological functioning ». Journal of Neurotrauma vol. 40 , nº 7-8. p. 649-664
K. L. Vandeloo, P. Burhunduli, S. Bouix, K. Owsia, K. I. K. Cho, Z. Fang, A. Van Geel, O. Pasternak, P. Blier, J. L. Phillips. 2023 « Free-water diffusion magnetic resonance imaging differentiates suicidal ideation from suicide attempt in treatment-resistant depression ». Biological Psychiatry: Cognitive Neuroscience and Neuroimaging vol. 8 , nº 4. p. 471-481
Scott W. Woods, Sophie Parker, Melissa J. Kerr, Barbara C. Walsh, S. Andrea Wijtenburg, Nicholas Prunier, Angela R. Nunez, Kate Buccilli, Catalina Mourgues-Codern, Kali Brummitt, Kyle S. Kinney, Carli Trankler, Julia Szacilo, Beau-Luke Colton, Munaza Ali, Anastasia Haidar, Tashrif Billah, Kevin Huynh, Uzair Ahmed, Laura L. Adery, Patricia J. Marcy, Kelly Allott, Paul Amminger, Celso Arango, Matthew R. Broome, Kristin S. Cadenhead, Eric Y. H. Chen, Jimmy Choi, Philippe Conus, Barbara A. Cornblatt, Louise Birkedal Glenthøj, Leslie E. Horton, Joseph Kambeitz, Tina Kapur, Matcheri S. Keshavan, Nikolaos Koutsouleris, Kerstin Langbein, Suzie Lavoie, Covadonga Martinez Diaz-Caneja, Daniel H. Mathalon, Vijay A. Mittal, Merete Nordentoft, Ofer Pasternak, Godfrey D. Pearlson, Pablo A. Gaspar, Jai L. Shah, Stefan Smesny, William S. Stone, Gregory P. Strauss, Jijun Wang, Cheryl M. Corcoran, Diana O. Perkins, Jason Schiffman, Jesus Perez, Daniel Mamah, Lauren M. Ellman, Albert R. Powers III, Michael J. Coleman, Alan Anticevic, Paolo Fusar-Poli, John M. Kane, Rene S. Kahn, Patrick D. McGorry, Carrie E. Bearden, Martha E. Shenton, Barnaby Nelson, Monica E. Calkins, Larry Hendricks, Sylvain Bouix, Jean Addington, Thomas H. McGlashan, Alison R. Yung. 2023 « Development of the PSYCHS: Positive SYmptoms and Diagnostic Criteria for the CAARMS Harmonized with the SIPS ». Early Intervention in Psychiatry
T. A. Zanao, J. Seitz-Holland, L. J. O'Donnell, F. Zhang, Y. Rathi, T. M. Lopes, L. R. Pimentel-Silva, C. L. Yassuda, N. Makris, M. E. Shenton, S. Bouix, A. E. Lyall, F. Cendes. 2023 « Exploring the impact of hippocampal sclerosis on white matter tracts memory in individuals with mesial temporal lobe epilepsy ». Epilepsia Open vol. 8 , nº 3. p. 1111-1122
Maria A. Di Biase, Michael P. Geaghan, William R. Reay, Jakob Seidlitz, Cynthia Shannon Weickert, Alice Pébay, Melissa J. Green, Yann Quidé, Joshua R. Atkins, Michael J. Coleman, Sylvain Bouix, Evdokiya E. Knyazhanskaya, Amanda E. Lyall, Ofer Pasternak, Marek Kubicki, Yogesh Rathi, Andrew Visco, Megan Gaunnac, Jinglei Lv, Raquelle I. Mesholam-Gately, Kathryn E. Lewandowski, Daphne J. Holt, Matcheri S. Keshavan, Christos Pantelis, Dost Öngür, Alan Breier, Murray J. Cairns, Martha E. Shenton, Andrew Zalesky. 2022 « Cell type-specific manifestations of cortical thickness heterogeneity in schizophrenia ». Molecular Psychiatry vol. 27 , nº 4. p. 2052-2060
É M. Foley, Y. Tripodis, E. Yhang, I. K. Koerte, B. M. Martin, J. Palmisano, N. Makris, V. Schultz, C. Lepage, M. Muehlmann, P. P. Wróbel, J. P. Guenette, R. C. Cantu, A. P. Lin, M. Coleman, J. Mez, S. Bouix, M. E. Shenton, R. A. Stern, M. L. Alosco. 2022 « Quantifying and examining reserve in symptomatic former national football league players ». Journal of Alzheimer's Disease vol. 85 , nº 2. p. 671-685
Elisabeth Kaufmann, Philine Rojczyk, Valerie J. Sydnor, Jeffrey P. Guenette, Yorghos Tripodis, David Kaufmann, Lisa Umminger, Johanna Seitz-Holland, Nico Sollmann, Yogesh Rathi, Sylvain Bouix, Catherine B. Fortier, David Salat, Ofer Pasternak, Sidney R. Hinds, William P. Milberg, Regina E. McGlinchey, Martha E. Shenton, Inga K. Koerte. 2022 « Association of War Zone–Related stress with alterations in limbic gray matter microstructure ». JAMA Network Open vol. 5 , nº 9
Zachary B. Millman, Melissa Hwang, Valerie J. Sydnor, Benjamin E. Reid, Joshua E. Goldenberg, Jessica N. Talero, Sylvain Bouix, Martha E. Shenton, Dost Öngür, Ann K. Shinn. 2022 « Auditory hallucinations, childhood sexual abuse, and limbic gray matter volume in a transdiagnostic sample of people with psychosis ». Schizophrenia vol. 8 , nº 1
R. Jarrett Rushmore, Kyle Sunderland, Holly Carrington, Justine Chen, Michael Halle, Andras Lasso, G. Papadimitriou, N. Prunier, Elizabeth Rizzoni, Brynn Vessey, Peter Wilson-Braun, Yogesh Rathi, Marek Kubicki, Sylvain Bouix, Edward Yeterian, Nikos Makris. 2022 « Anatomically curated segmentation of human subcortical structures in high resolution magnetic resonance imaging: An open science approach ». Frontiers in Neuroanatomy vol. 16
Richard Jarrett Rushmore, Sylvain Bouix, Marek Kubicki, Yogesh Rathi, Edward Yeterian, Nikos Makris. 2022 « HOA2.0-ComPaRe: A next generation Harvard-Oxford Atlas comparative parcellation reasoning method for human and macaque individual brain parcellation and atlases of the cerebral cortex ». Frontiers in Neuroanatomy vol. 16
M. Uretsky, S. Bouix, R. J. Killiany, Y. Tripodis, B. Martin, J. Palmisano, A. Z. Mian, K. Buch, C. Farris, D. H. Daneshvar, B. Dwyer, L. Goldstein, D. Katz, C. Nowinski, R. Cantu, N. Kowall, B. R. Huber, R. A. Stern, V. E. Alvarez, T. D. Stein, A. McKee, J. Mez, M. L. Alosco. 2022 « Association between antemortem FLAIR white matter hyperintensities and neuropathology in brain donors exposed to repetitive head impacts ». Neurology vol. 98 , nº 1. p. E27-E39
M. L. Alosco, M. L. Mariani, C. H. Adler, L. J. Balcer, C. Bernick, R. Au, S. J. Banks, W. B. Barr, S. Bouix, R. C. Cantu, M. J. Coleman, D. W. Dodick, L. A. Farrer, Y. E. Geda, D. I. Katz, I. K. Koerte, N. W. Kowall, A. P. Lin, D. S. Marcus, K. L. Marek, M. D. McClean, A. C. McKee, J. Mez, J. N. Palmisano, E. R. Peskind, Y. Tripodis, R. W. II Turner, J. V. Wethe, J. L. Cummings, E. M. Reiman, M. E. Shenton, R. A. Stern, S. Banks, W. Barr, K. Chen, L. Farrer, J. Fitzsimmons, Y. Geda, J. Goldberg, R. Helm, K. A. Johnson, I. Kirov, N. Kowall, Y. Lui, M. Mariani, C. Marmar, M. McClean, J. Miller, O. Pasternak, H. Protas, E. Reiman, A. Ritter, R. A. Stern, Y. Su, R. W. Turner, J. Weller. 2021 « Developing methods to detect and diagnose chronic traumatic encephalopathy during life: rationale, design, and methodology for the DIAGNOSE CTE Research Project ». Alzheimer's Research and Therapy vol. 13 , nº 1
E. C. Del Re, W. S. Stone, S. Bouix, J. Seitz, V. Zeng, A. Guliano, N. Somes, T. Zhang, B. Reid, A. Lyall, M. Lyons, H. Li, S. Whitfield-Gabrieli, M. Keshavan, L. J. Seidman, R. W. McCarley, J. Wang, Y. Tang, M. E. Shenton, M. A. Niznikiewicz. 2021 « Baseline cortical thickness reductions in clinical high risk for psychosis: Brain regions associated with conversion to psychosis versus non-conversion as assessed at one-year follow-up in the shanghai-at-risk-for-psychosis (SHARP) study ». Schizophrenia Bulletin vol. 47 , nº 2. p. 562-574
M. A. Di Biase, S. Cetin-Karayumak, A. E. Lyall, A. Zalesky, K. I. K. Cho, F. Zhang, M. Kubicki, Y. Rathi, M. G. Lyons, S. Bouix, T. Billah, A. Anticevic, C. Schleifer, B. D. Adkinson, J. L. Ji, Z. Tamayo, J. Addington, C. E. Bearden, B. A. Cornblatt, M. S. Keshavan, D. H. Mathalon, T. H. McGlashan, D. O. Perkins, K. S. Cadenhead, M. T. Tsuang, S. W. Woods, W. S. Stone, M. E. Shenton, T. D. Cannon, O. Pasternak. 2021 « White matter changes in psychosis risk relate to development and are not impacted by the transition to psychosis ». Molecular Psychiatry vol. 26 , nº 11. p. 6833-6844
D. Elad, S. Cetin-Karayumak, F. Zhang, K. I. K. Cho, A. E. Lyall, J. Seitz-Holland, R. Ben-Ari, G. D. Pearlson, C. A. Tamminga, J. A. Sweeney, B. A. Clementz, D. J. Schretlen, P. V. Viher, K. Stegmayer, S. Walther, J. Lee, T. J. Crow, A. James, A. N. Voineskos, R. W. Buchanan, P. R. Szeszko, A. K. Malhotra, M. S. Keshavan, M. E. Shenton, Y. Rathi, S. Bouix, N. Sochen, M. R. Kubicki, O. Pasternak. 2021 « Improving the predictive potential of diffusion MRI in schizophrenia using normative models - Towards subject-level classification ». Human Brain Mapping vol. 42 , nº 14. p. 4658-4670
M. Geisler, E. Rizzoni, N. Makris, O. Pasternak, Y. Rathi, S. Bouix, M. Herbsleb, K. J. Bär, T. Weiss, Z. Kikinis. 2021 « Microstructural alterations in medial forebrain bundle are associated with interindividual pain sensitivity ». Human Brain Mapping vol. 42 , nº 4. p. 1130-1137
M. Jáni, Z. Kikinis, J. Lošák, O. Pasternak, F. Szczepankiewicz, C. Heller, S. Swago, A. Silva, S. Bouix, M. Kubicki, L. Ustohal, P. Kudlička, L. Vojtíšek, C. F. Westin, T. Kašpárek. 2021 « Emotional awareness in schizophrenia is associated with gray matter volume of right precuneus ». Frontiers in Psychiatry vol. 12
D. Kaufmann, N. Sollmann, E. Kaufmann, R. Veggeberg, Y. Tripodis, P. P. Wrobel, J. Kochsiek, B. M. Martin, A. P. Lin, M. J. Coleman, M. L. Alosco, O. Pasternak, S. Bouix, R. A. Stern, M. E. Shenton, I. K. Koerte. 2021 « Age at first exposure to tackle football is associated with cortical thickness in former professional american football players ». Cerebral Cortex vol. 31 , nº 7. p. 3426-3434
J. Kochsiek, L. J. O'Donnell, F. Zhang, E. M. Bonke, N. Sollmann, Y. Tripodis, T. L. T. Wiegand, D. Kaufmann, L. Umminger, M. A. Di Biase, E. Kaufmann, V. Schultz, M. L. Alosco, B. M. Martin, A. P. Lin, M. J. Coleman, Y. Rathi, O. Pasternak, S. Bouix, R. A. Stern, M. E. Shenton, I. K. Koerte. 2021 « Exposure to repetitive head impacts is associated with corpus callosum microstructure and plasma total tau in former professional american football players ». Journal of Magnetic Resonance Imaging vol. 54 , nº 6. p. 1819-1829
I. K. Koerte, C. Esopenko, S. R. II Hinds, M. E. Shenton, E. M. Bonke, J. J. Bazarian, K. C. Bickart, E. D. Bigler, S. Bouix, T. A. Buckley, M. C. Choe, P. S. Echlin, J. Gill, C. C. Giza, J. Hayes, C. B. Hodges, A. Irimia, P. K. Johnson, K. Kenney, H. S. Levin, A. P. Lin, H. M. Lindsey, M. L. Lipton, J. E. Max, A. R. Mayer, T. B. Meier, K. Merchant-Borna, T. L. Merkley, B. D. Mills, M. R. Newsome, T. Porfido, J. A. Stephens, M. C. Tartaglia, A. L. Ware, R. D. Zafonte, M. M. Zeineh, P. M. Thompson, D. F. Tate, E. L. Dennis, E. A. Wilde, D. Baron. 2021 « The ENIGMA sports injury working group:– an international collaboration to further our understanding of sport-related brain injury ». Brain Imaging and Behavior vol. 15 , nº 2. p. 576-584
R. J. Rushmore, S. Bouix, M. Kubicki, Y. Rathi, D. L. Rosene, E. H. Yeterian, N. Makris. 2021 « MRI-based Parcellation and Morphometry of the Individual Rhesus Monkey Brain: the macaque Harvard-Oxford Atlas (mHOA), a translational system referencing a standardized ontology ». Brain Imaging and Behavior vol. 15 , nº 3. p. 1589-1621
J. Bomyea, A. N. Simmons, M. E. Shenton, M. J. Coleman, S. Bouix, Y. Rathi, O. Pasternak, R. Coimbra, L. Shutter, M. S. George, G. Grant, R. D. Zafonte, T. W. McAllister, M. B. Stein. 2020 « Neurocognitive markers of childhood abuse in individuals with PTSD: Findings from the INTRuST Clinical Consortium ». Journal of Psychiatric Research vol. 121. p. 108-117
C. Heller, S. Steinmann, J. J. Levitt, N. Makris, K. M. Antshel, W. Fremont, I. L. Coman, S. R. Schweinberger, T. Weiß, S. Bouix, M. R. Kubicki, W. R. Kates, Z. Kikinis. 2020 « Abnormalities in white matter tracts in the fronto-striatal-thalamic circuit are associated with verbal performance in 22q11.2DS ». Schizophrenia Research vol. 224. p. 141-150
P. Kinzel, C. E. Marx, N. Sollmann, E. Hartl, J. P. Guenette, D. Kaufmann, S. Bouix, O. Pasternak, Y. Rathi, M. J. Coleman, A. van der Kouwe, K. Helmer, J. D. Kilts, J. C. Naylor, R. A. Morey, L. Shutter, N. Andaluz, R. Coimbra, A. J. Lang, M. S. George, T. W. McAllister, R. Zafonte, M. B. Stein, M. E. Shenton, I. K. Koerte. 2020 « Serum neurosteroid levels are associated with cortical thickness in individuals diagnosed with posttraumatic stress disorder and history of mild traumatic brain injury ». Clinical EEG and Neuroscience vol. 51 , nº 4. p. 285-299
Kathryn E. Lewandowski, Sylvain Bouix, Dost Ongur, Martha E. Shenton. 2020 « Neuroprogression across the early course of psychosis ». Journal of Psychiatry and Brain Science vol. 5 , nº 1
R. J. Rushmore, P. Wilson-Braun, G. Papadimitriou, I. Ng, Y. Rathi, F. Zhang, L. J. O’Donnell, M. Kubicki, S. Bouix, E. Yeterian, J. J. Lemaire, E. Calabrese, G. A. Johnson, R. Kikinis, N. Makris. 2020 « 3D exploration of the brainstem in 50-micron resolution MRI ». Frontiers in Neuroanatomy vol. 14
V. J. Sydnor, S. Bouix, O. Pasternak, E. Hartl, L. Levin-Gleba, B. Reid, Y. Tripodis, J. P. Guenette, D. Kaufmann, N. Makris, C. Fortier, D. H. Salat, Y. Rathi, W. P. Milberg, R. E. McGlinchey, M. E. Shenton, I. K. Koerte. 2020 « Mild traumatic brain injury impacts associations between limbic system microstructure and post-traumatic stress disorder symptomatology ». NeuroImage: Clinical vol. 26
M. L. Alosco, Y. Tripodis, I. K. Koerte, J. D. Jackson, A. S. Chua, M. Mariani, O. Haller, É M. Foley, B. M. Martin, J. Palmisano, B. Singh, K. Green, C. Lepage, M. Muehlmann, N. Makris, R. C. Cantu, A. P. Lin, M. Coleman, O. Pasternak, J. Mez, S. Bouix, M. E. Shenton, R. A. Stern. 2019 « Interactive effects of racial identity and repetitive head impacts on cognitive function, structural mri-derived volumetric measures, and cerebrospinal fluid tau and Aβ ». Frontiers in Human Neuroscience vol. 13
S. Cetin Karayumak, S. Bouix, L. Ning, A. James, T. Crow, M. Shenton, M. Kubicki, Y. Rathi. 2019 « Retrospective harmonization of multi-site diffusion MRI data acquired with different acquisition parameters ». NeuroImage vol. 184. p. 180-200
E. C. del Re, S. Bouix, J. Fitzsimmons, G. A. M. Blokland, R. Mesholam-Gately, J. Wojcik, Z. Kikinis, M. Kubicki, T. Petryshen, O. Pasternak, M. E. Shenton, M. Niznikiewicz. 2019 « Diffusion abnormalities in the corpus callosum in first episode schizophrenia: Associated with enlarged lateral ventricles and symptomatology ». Psychiatry Research vol. 277. p. 45-51
Z. Kikinis, N. Makris, V. J. Sydnor, S. Bouix, O. Pasternak, I. L. Coman, K. M. Antshel, W. Fremont, M. R. Kubicki, M. E. Shenton, W. R. Kates, Y. Rathi. 2019 « Abnormalities in gray matter microstructure in young adults with 22q11.2 deletion syndrome ». NeuroImage: Clinical vol. 21
M. Kubicki, M. Baxi, O. Pasternak, Y. Tang, S. Karmacharya, N. Chunga, A. E. Lyall, Y. Rathi, R. Eckbo, S. Bouix, F. Mortazavi, G. Papadimitriou, M. E. Shenton, C. F. Westin, R. Killiany, N. Makris, D. L. Rosene. 2019 « Lifespan trajectories of white matter changes in rhesus monkeys ». Cerebral Cortex vol. 29 , nº 4. p. 1584-1593
S. Kelly, N. Jahanshad, A. Zalesky, P. Kochunov, I. Agartz, C. Alloza, O. A. Andreassen, C. Arango, N. Banaj, S. Bouix, C. A. Bousman, R. M. Brouwer, J. Bruggemann, J. Bustillo, W. Cahn, V. Calhoun, D. Cannon, V. Carr, S. Catts, J. Chen, J. X. Chen, X. Chen, C. Chiapponi, K. K. Cho, V. Ciullo, A. S. Corvin, B. Crespo-Facorro, V. Cropley, P. De Rossi, C. M. Diaz-Caneja, E. W. Dickie, S. Ehrlich, F. M. Fan, J. Faskowitz, H. Fatouros-Bergman, L. Flyckt, J. M. Ford, J. P. Fouche, M. Fukunaga, M. Gill, D. C. Glahn, R. Gollub, E. D. Goudzwaard, H. Guo, R. E. Gur, R. C. Gur, T. P. Gurholt, R. Hashimoto, S. N. Hatton, F. A. Henskens, D. P. Hibar, I. B. Hickie, L. E. Hong, J. Horacek, F. M. Howells, H. E. Hulshoff Pol, C. L. Hyde, D. Isaev, A. Jablensky, P. R. Jansen, J. Janssen, E. G. Jönsson, L. A. Jung, R. S. Kahn, Z. Kikinis, K. Liu, P. Klauser, C. Knöchel, M. Kubicki, J. Lagopoulos, C. Langen, S. Lawrie, R. K. Lenroot, K. O. Lim, C. Lopez-Jaramillo, A. Lyall, V. Magnotta, R. C. W. Mandl, D. H. Mathalon, R. W. McCarley, S. McCarthy-Jones, C. McDonald, S. McEwen, A. McIntosh, T. Melicher, R. I. Mesholam-Gately, P. T. Michie, B. Mowry, B. A. Mueller, D. T. Newell, P. O'Donnell, V. Oertel-Knöchel, L. Oestreich, S. A. Paciga, C. Pantelis, O. Pasternak, G. Pearlson, G. R. Pellicano, A. Pereira, J. Pineda Zapata. 2018 « Widespread white matter microstructural differences in schizophrenia across 4322 individuals: Results from the ENIGMA Schizophrenia DTI Working Group ». Molecular Psychiatry vol. 23 , nº 5. p. 1261-1269
J. Konishi, E. C. del Re, S. Bouix, G. A. M. Blokland, R. Mesholam-Gately, K. Woodberry, M. Niznikiewicz, J. Goldstein, Y. Hirayasu, T. L. Petryshen, L. J. Seidman, M. E. Shenton, R. W. McCarley. 2018 « Abnormal relationships between local and global brain measures in subjects at clinical high risk for psychosis: A pilot study ». Brain Imaging and Behavior vol. 12 , nº 4. p. 974-988
J. Lee, M. W. Chon, H. Kim, Y. Rathi, S. Bouix, M. E. Shenton, M. Kubicki. 2018 « Diagnostic value of structural and diffusion imaging measures in schizophrenia ». NeuroImage: Clinical vol. 18. p. 467-474
C. Lepage, A. de Pierrefeu, I. K. Koerte, M. J. Coleman, O. Pasternak, G. Grant, C. E. Marx, R. A. Morey, L. A. Flashman, M. S. George, T. W. McAllister, N. Andaluz, L. Shutter, R. Coimbra, R. D. Zafonte, M. B. Stein, M. E. Shenton, S. Bouix. 2018 « White matter abnormalities in mild traumatic brain injury with and without post-traumatic stress disorder: A subject-specific diffusion tensor imaging study ». Brain Imaging and Behavior vol. 12 , nº 3. p. 870-881
H. Mirzaalian, L. Ning, P. Savadjiev, O. Pasternak, S. Bouix, O. Michailovich, S. Karmacharya, G. Grant, C. E. Marx, R. A. Morey, L. A. Flashman, M. S. George, T. W. McAllister, N. Andaluz, L. Shutter, R. Coimbra, R. D. Zafonte, M. J. Coleman, M. Kubicki, C. F. Westin, M. B. Stein, M. E. Shenton, Y. Rathi. 2018 « Multi-site harmonization of diffusion MRI data in a registration framework ». Brain Imaging and Behavior vol. 12 , nº 1. p. 284-295
Y. Saito, M. Kubicki, I. Koerte, T. Otsuka, Y. Rathi, O. Pasternak, S. Bouix, R. Eckbo, Z. Kikinis, C. C. von Hohenberg, T. Roppongi, E. Del Re, T. Asami, S. H. Lee, S. Karmacharya, R. I. Mesholam-Gately, L. J. Seidman, J. Levitt, R. W. McCarley, M. E. Shenton, M. A. Niznikiewicz. 2018 « Impaired white matter connectivity between regions containing mirror neurons, and relationship to negative symptoms and social cognition, in patients with first-episode schizophrenia ». Brain Imaging and Behavior vol. 12 , nº 1. p. 229-237
N. Sollmann, P. S. Echlin, V. Schultz, P. V. Viher, A. E. Lyall, Y. Tripodis, D. Kaufmann, E. Hartl, P. Kinzel, L. A. Forwell, A. M. Johnson, E. N. Skopelja, C. Lepage, S. Bouix, O. Pasternak, A. P. Lin, M. E. Shenton, I. K. Koerte. 2018 « Sex differences in white matter alterations following repetitive subconcussive head impacts in collegiate ice hockey players ». NeuroImage: Clinical vol. 17. p. 642-649
V. J. Sydnor, A. M. Rivas-Grajales, A. E. Lyall, F. Zhang, S. Bouix, S. Karmacharya, M. E. Shenton, C. F. Westin, N. Makris, D. Wassermann, L. J. O'Donnell, M. Kubicki. 2018 « A comparison of three fiber tract delineation methods and their impact on white matter analysis ». NeuroImage vol. 178. p. 318-331
Z. Kikinis, K. I. K. Cho, I. L. Coman, P. D. Radoeva, S. Bouix, Y. Tang, R. Eckbo, N. Makris, J. S. Kwon, M. Kubicki, K. M. Antshel, W. Fremont, M. E. Shenton, W. R. Kates. 2017 « Abnormalities in brain white matter in adolescents with 22q11.2 deletion syndrome and psychotic symptoms ». Brain Imaging and Behavior vol. 11 , nº 5. p. 1353-1364
Z. Kikinis, M. Muehlmann, O. Pasternak, S. Peled, P. Kulkarni, C. Ferris, S. Bouix, Y. Rathi, I. K. Koerte, S. Pieper, A. Yarmarkovich, C. L. Porter, B. S. Kristal, M. E. Shenton. 2017 « Diffusion imaging of mild traumatic brain injury in the impact accelerated rodent model: A pilot study ». Brain Injury vol. 31 , nº 10. p. 1376-1381
L. K. L. Oestreich, A. E. Lyall, O. Pasternak, Z. Kikinis, D. T. Newell, P. Savadjiev, S. Bouix, M. E. Shenton, M. Kubicki, T. J. Whitford, S. McCarthy-Jones. 2017 « Characterizing white matter changes in chronic schizophrenia: A free-water imaging multi-site study ». Schizophrenia Research vol. 189. p. 153-161
T. Ohtani, P. G. Nestor, S. Bouix, D. Newell, E. D. Melonakos, R. W. McCarley, M. E. Shenton, M. Kubicki. 2017 « Exploring the neural substrates of attentional control and human intelligence: Diffusion tensor imaging of prefrontal white matter tractography in healthy cognition ». Neuroscience vol. 341. p. 52-60
Amy K. Olszewski, Zora Kikinis, Christie S. Gonzalez, Ioana L. Coman, Nikolaos Makris, Xue Gong, Yogesh Rathi, Anni Zhu, Kevin M. Antshel, Wanda Fremont, Marek R. Kubicki, Sylvain Bouix, Martha E. Shenton, Wendy R. Kates. 2017 « The social brain network in 22q11.2 deletion syndrome: A diffusion tensor imaging study ». Behavioral and Brain Functions vol. 13 , nº 1
Matineh Shaker, Deniz Erdogmus, Jennifer Dy, Sylvain Bouix. 2017 « Subject-specific abnormal region detection in traumatic brain injury using sparse model selection on high dimensional diffusion data ». Medical Image Analysis vol. 37. p. 56-65
E. C. del Re, Y. Gao, R. Eckbo, T. L. Petryshen, G. A. M. Blokland, L. J. Seidman, J. Konishi, J. M. Goldstein, R. W. McCarley, M. E. Shenton, S. Bouix. 2016 « A new MRI masking technique based on multi-atlas brain segmentation in controls and schizophrenia: A rapid and viable alternative to manual masking ». Journal of Neuroimaging vol. 26 , nº 1. p. 28-36
E. C. del Re, J. Konishi, S. Bouix, G. A. M. Blokland, R. I. Mesholam-Gately, J. Goldstein, M. Kubicki, J. Wojcik, O. Pasternak, L. J. Seidman, T. Petryshen, Y. Hirayasu, M. Niznikiewicz, M. E. Shenton, R. W. McCarley. 2016 « Enlarged lateral ventricles inversely correlate with reduced corpus callosum central volume in first episode schizophrenia: association with functional measures ». Brain Imaging and Behavior vol. 10 , nº 4. p. 1264-1273
Yi Gao, Sylvain Bouix. 2016 « Statistical shape analysis using 3D Poisson equation-quantitatively validated approach ». Medical Image Analysis vol. 30. p. 72-84
J. S. Lee, C. Y. Kim, Y. H. Joo, D. Newell, S. Bouix, M. E. Shenton, M. Kubicki. 2016 « Increased diffusivity in gray matter in recent onset schizophrenia is associated with clinical symptoms and social cognition ». Schizophrenia Research vol. 176 , nº 2-3. p. 144-150
H. Mirzaalian, L. Ning, P. Savadjiev, O. Pasternak, S. Bouix, O. Michailovich, G. Grant, C. E. Marx, R. A. Morey, L. A. Flashman, M. S. George, T. W. McAllister, N. Andaluz, L. Shutter, R. Coimbra, R. D. Zafonte, M. J. Coleman, M. Kubicki, C. F. Westin, M. B. Stein, M. E. Shenton, Y. Rathi. 2016 « Inter-site and inter-scanner diffusion MRI data harmonization ». NeuroImage vol. 135. p. 311-323
J. Seitz, J. X. Zuo, A. E. Lyall, N. Makris, Z. Kikinis, S. Bouix, O. Pasternak, E. Fredman, J. Duskin, J. M. Goldstein, T. L. Petryshen, R. I. Mesholam-Gately, J. Wojcik, R. W. McCarley, L. J. Seidman, M. E. Shenton, I. K. Koerte, M. Kubicki. 2016 « Tractography analysis of 5 white matter bundles and their clinical and cognitive correlates in early-course schizophrenia ». Schizophrenia Bulletin vol. 42 , nº 3. p. 762-771
Y. Gao, L. Zhu, J. Cates, R. S. MacLeod, S. Bouix, A. Tannenbaum. 2015 « A Kalman filtering perspective for multiatlas segmentation ». SIAM Journal on Imaging Sciences vol. 8 , nº 2. p. 1007-1029
Yi Hong, Yi Gao, Marc Niethammer, Sylvain Bouix. 2015 « Shape analysis based on depth-ordering ». Medical Image Analysis vol. 25 , nº 1. p. 2-10
Z. Kikinis, J. Fitzsimmons, C. Dunn, M. A. Vu, N. Makris, S. Bouix, J. M. Goldstein, R. I. Mesholam-Gately, T. Petryshen, E. C. del Re, J. Wojcik, L. J. Seidman, M. Kubicki. 2015 « Anterior commissural white matter fiber abnormalities in first-episode psychosis: A tractography study ». Schizophrenia Research vol. 162 , nº 1-3. p. 29-34
I. K. Koerte, A. P. Lin, A. Willems, M. Muehlmann, J. Hufschmidt, M. J. Coleman, I. Green, H. Liao, D. F. Tate, E. A. Wilde, O. Pasternak, S. Bouix, Y. Rathi, E. D. Bigler, R. A. Stern, M. E. Shenton. 2015 « A review of neuroimaging findings in repetitive brain trauma ». Brain Pathology vol. 25 , nº 3. p. 318-349
P. G. Nestor, T. Ohtani, S. Bouix, T. Hosokawa, Y. Saito, D. T. Newell, M. Kubicki. 2015 « Dissociating prefrontal circuitry in intelligence and memory: neuropsychological correlates of magnetic resonance and diffusion tensor imaging ». Brain Imaging and Behavior vol. 9 , nº 4. p. 839-847
T. Ohtani, S. Bouix, A. E. Lyall, T. Hosokawa, Y. Saito, E. Melonakos, C. F. Westin, L. J. Seidman, J. Goldstein, R. Mesholam-Gately, T. Petryshen, J. Wojcik, M. Kubicki. 2015 « Abnormal white matter connections between medial frontal regions predict symptoms in patients with first episode schizophrenia ». Cortex vol. 71. p. 264-276
W. J. Panenka, R. T. Lange, S. Bouix, J. R. Shewchuk, M. K. S. Heran, J. R. Brubacher, R. Eckbo, M. E. Shenton, G. L. Iverson. 2015 « Neuropsychological outcome and diffusion tensor imaging in complicated versus uncomplicated mild traumatic brain injury ». PLoS ONE vol. 10 , nº 4
O. Pasternak, C. F. Westin, B. Dahlben, S. Bouix, M. Kubicki. 2015 « The extent of diffusion MRI markers of neuroinflammation and white matter deterioration in chronic schizophrenia ». Schizophrenia Research vol. 161 , nº 1. p. 113-118
J. M. Stamm, I. K. Koerte, M. Muehlmann, O. Pasternak, A. P. Bourlas, C. M. Baugh, M. Y. Giwerc, A. Zhu, M. J. Coleman, S. Bouix, N. G. Fritts, B. M. Martin, C. Chaisson, M. D. McClean, A. P. Lin, R. C. Cantu, Y. Tripodis, R. A. Stern, M. E. Shenton. 2015 « Age at first exposure to football is associated with altered corpus callosum white matter microstructure in former professional football players ». Journal of Neurotrauma vol. 32 , nº 22. p. 1768-1776
D. F. Tate, E. A. Wilde, S. Bouix, S. R. McCauley. 2015 « Introduction to the brain imaging and behavior special issue: mild traumatic brain injury among active duty service members and veterans ». Brain Imaging and Behavior vol. 9 , nº 3. p. 355-357
M. Wigand, M. Kubicki, C. Clemm Von Hohenberg, G. Leicht, S. Karch, R. Eckbo, P. E. Pelavin, K. Hawley, D. Rujescu, S. Bouix, M. E. Shenton, C. Mulert. 2015 « Auditory verbal hallucinations and the interhemispheric auditory pathway in chronic schizophrenia ». World Journal of Biological Psychiatry vol. 16 , nº 1. p. 31-44
E. A. Wilde, S. Bouix, D. F. Tate, A. P. Lin, M. R. Newsome, B. A. Taylor, J. R. Stone, J. Montier, S. E. Gandy, B. Biekman, M. E. Shenton, G. York. 2015 « Advanced neuroimaging applied to veterans and service personnel with traumatic brain injury: state of the art and potential benefits ». Brain Imaging and Behavior vol. 9 , nº 3. p. 367-402
J. C. Yang, G. Papadimitriou, R. Eckbo, E. H. Yeterian, L. Liang, D. D. Dougherty, S. Bouix, Y. Rathi, M. Shenton, M. Kubicki, E. N. Eskandar, N. Makris. 2015 « Multi-tensor investigation of orbitofrontal cortex tracts affected in subcaudate tractotomy ». Brain Imaging and Behavior vol. 9 , nº 2. p. 342-352
T. Asami, S. Hyuk Lee, S. Bouix, Y. Rathi, T. J. Whitford, M. Niznikiewicz, P. Nestor, R. W. McCarley, M. E. Shenton, M. Kubicki. 2014 « Cerebral white matter abnormalities and their associations with negative but not positive symptoms of schizophrenia ». Psychiatry Research - Neuroimaging vol. 222 , nº 1-2. p. 52-59
P. S. Echlin, A. M. Johnson, J. D. Holmes, A. Tichenoff, S. Gray, H. Gatavackas, J. Walsh, T. Middlebro, A. Blignaut, M. MacIntyre, C. Anderson, E. Fredman, M. Mayinger, E. N. Skopelja, T. Sasaki, S. Bouix, O. Pasternak, K. G. Helmer, I. K. Koerte, M. E. Shenton, L. A. Forwell. 2014 « The sport concussion education project. a brief report on an educational initiative: From concept to curriculum ». Journal of Neurosurgery vol. 121 , nº 6. p. 1331-1336
Yi Gao, Tammy Riklin-Raviv, Sylvain Bouix. 2014 « Shape analysis, a field in need of careful validation ». Human Brain Mapping vol. 35 , nº 10. p. 4965-4978
J. Hüttlova, Z. Kikinis, M. Kerkovsky, S. Bouix, M. A. Vu, N. Makris, M. Shenton, T. Kasparek. 2014 « Abnormalities in myelination of the superior cerebellar peduncle in patients with schizophrenia and deficits in movement sequencing ». Cerebellum vol. 13 , nº 4. p. 415-424
T. S. C. Ng, A. P. Lin, I. K. Koerte, O. Pasternak, H. Liao, S. Merugumala, S. Bouix, M. E. Shenton. 2014 « Neuroimaging in repetitive brain trauma ». Alzheimer's Research and Therapy vol. 6 , nº 1
T. Ohtani, S. Bouix, T. Hosokawa, Y. Saito, R. Eckbo, T. Ballinger, A. Rausch, E. Melonakos, M. Kubicki. 2014 « Abnormalities in white matter connections between orbitofrontal cortex and anterior cingulate cortex and their associations with negative symptoms in schizophrenia: A DTI study ». Schizophrenia Research vol. 157 , nº 1-3. p. 190-197
T. Ohtani, P. G. Nestor, S. Bouix, Y. Saito, T. Hosokawa, M. Kubicki. 2014 « Medial frontal white and gray matter contributions to general intelligence ». PLoS ONE vol. 9 , nº 12
O. Pasternak, I. K. Koerte, S. Bouix, E. Fredman, T. Sasaki, M. Mayinger, K. G. Helmer, A. M. Johnson, J. D. Holmes, L. A. Forwell, E. N. Skopelja, M. E. Shenton, P. S. Echlin. 2014 « Hockey concussion education project, part 2. Microstructural white matter alterations in acutely concussed ice hockey players: A longitudinal free-water MRI study ». Journal of Neurosurgery vol. 120 , nº 4. p. 873-881
Y. Rathi, O. Pasternak, P. Savadjiev, O. Michailovich, S. Bouix, M. Kubicki, C. F. Westin, N. Makris, M. E. Shenton. 2014 « Gray matter alterations in early aging: A diffusion magnetic resonance imaging study ». Human Brain Mapping vol. 35 , nº 8. p. 3841-3856
T. R. Raviv, Y. Gao, J. J. Levitt, S. Bouix. 2014 « Statistical shape analysis of neuroanatomical structures via level-set-based shape morphing ». SIAM Journal on Imaging Sciences vol. 7 , nº 3. p. 1645-1668
T. Sasaki, O. Pasternak, M. Mayinger, M. Muehlmann, P. Savadjiev, S. Bouix, M. Kubicki, E. Fredman, B. Dahlben, K. G. Helmer, A. M. Johnson, J. D. Holmes, L. A. Forwell, E. N. Skopelja, M. E. Shenton, P. S. Echlin, I. K. Koerte. 2014 « Hockey concussion education project, part 3. White matter microstructure in ice hockey players with a history of concussion: A diffusion tensor imaging study ». Journal of Neurosurgery vol. 120 , nº 4. p. 882-890
P. Savadjiev, Y. Rathi, S. Bouix, A. R. Smith, R. T. Schultz, R. Verma, C. F. Westin. 2014 « Fusion of white and gray matter geometry: A framework for investigating brain development ». Medical Image Analysis vol. 18 , nº 8. p. 1349-1360
P. Savadjiev, T. J. Whitford, M. E. Hough, C. Clemm Von Hohenberg, S. Bouix, C. F. Westin, M. E. Shenton, T. J. Crow, A. C. James, M. Kubicki. 2014 « Sexually dimorphic white matter geometry abnormalities in adolescent onset schizophrenia ». Cerebral Cortex vol. 24 , nº 5. p. 1389-1396
T. Asami, T. J. Whitford, S. Bouix, C. C. Dickey, M. Niznikiewicz, M. E. Shenton, M. M. Voglmaier, R. W. McCarley. 2013 « Globally and locally reduced MRI gray matter volumes in neuroleptic-naive men with schizotypal personality disorder ». JAMA Psychiatry vol. 70 , nº 4. p. 361-372
S. Bouix, O. Pasternak, Y. Rathi, P. E. Pelavin, R. Zafonte, M. E. Shenton. 2013 « Increased gray matter diffusion anisotropy in patients with persistent post-concussive symptoms following mild traumatic brain injury ». PLoS ONE vol. 8 , nº 6
Christian Clemm von Hohenberg, Marlene C. Wigand, Marek Kubicki, Gregor Leicht, Ina Giegling, Susanne Karch, Annette M. Hartmann, Bettina Konte, Marion Friedl, Thomas Ballinger, Ryan Eckbo, Sylvain Bouix, Lorenz Jäger, Martha E. Shenton, Dan Rujescu, Christoph Mulert. 2013 « CNTNAP2 polymorphisms and structural brain connectivity: A diffusion-tensor imaging study ». Journal of Psychiatric Research vol. 47 , nº 10. p. 1349-1356
Yi Gao, Sylvain Bouix, Martha Shenton, Allen Tannenbaum. 2013 « Sparse texture active contour ». IEEE Transactions on Image Processing vol. 22 , nº 10. p. 3866-3878
Z. Kikinis, N. Makris, C. T. Finn, S. Bouix, D. Lucia, M. J. Coleman, E. Tworog-Dube, R. Kikinis, R. Kucherlapati, M. E. Shenton, M. Kubicki. 2013 « Genetic contributions to changes of fiber tracts of ventral visual stream in 22q11.2 deletion syndrome ». Brain Imaging and Behavior vol. 7 , nº 3. p. 316-325
A. Sampaio, S. Bouix, N. Sousa, C. Vasconcelos, M. Férnandez, M. E. Shenton, O. F. Gonçalves. 2013 « Morphometry of corpus callosum in Williams syndrome: Shape as an index of neural development ». Brain Structure and Function vol. 218 , nº 3. p. 711-720
T. Asami, S. Bouix, T. J. Whitford, M. E. Shenton, D. F. Salisbury, R. W. McCarley. 2012 « Longitudinal loss of gray matter volume in patients with first-episode schizophrenia: DARTEL automated analysis and ROI validation ». NeuroImage vol. 59 , nº 2. p. 986-996
Y. Gao, R. Kikinis, S. Bouix, M. Shenton, A. Tannenbaum. 2012 « A 3D interactive multi-object segmentation tool using local robust statistics driven active contours ». Medical Image Analysis vol. 16 , nº 6. p. 1216-1227
Y. Gao, Z. Li, Z. Lin, L. Zhu, A. Tannenbaum, S. Bouix, C. P. Wong. 2012 « Automated dispersion and orientation analysis for carbon nanotube reinforced polymer composites ». Nanotechnology vol. 23 , nº 43
Yi Gao, Yogesh Rathi, Sylvain Bouix, Allen Tannenbaum. 2012 « Filtering in the diffeomorphism group and the registration of point sets ». IEEE Transactions on Image Processing vol. 21 , nº 10. p. 4383-4396
Z. Kikinis, T. Asami, S. Bouix, C. T. Finn, T. Ballinger, E. Tworog-Dube, R. Kucherlapati, R. Kikinis, M. E. Shenton, M. Kubicki. 2012 « Reduced fractional anisotropy and axial diffusivity in white matter in 22q11.2 deletion syndrome: A pilot study ». Schizophrenia Research vol. 141 , nº 1. p. 35-39
I. K. Koerte, D. Kaufmann, E. Hartl, S. Bouix, O. Pasternak, M. Kubicki, A. Rauscher, D. K. B. Li, S. B. Dadachanji, J. A. Taunton, L. A. Forwell, A. M. Johnson, P. S. Echlin, M. E. Shenton. 2012 « A prospective study of physician-observed concussion during a varsity university hockey season: White matter integrity in ice hockey players. Part 3 of 4 ». Neurosurgical Focus vol. 33 , nº 6
O. Pasternak, C. F. Westin, S. Bouix, L. J. Seidman, J. M. Goldstein, T. U. Woo, T. L. Petryshen, R. I. Mesholam-Gately, R. W. McCarley, R. Kikinis, M. E. Shenton, M. Kubicki. 2012 « Excessive extracellular volume reveals a neurodegenerative pattern in schizophrenia onset ». Journal of Neuroscience vol. 32 , nº 48. p. 17365-17372
G. Rosenberger, P. G. Nestor, J. S. Oh, J. J. Levitt, G. Kindleman, S. Bouix, J. Fitzsimmons, M. Niznikiewicz, C. F. Westin, R. Kikinis, R. W. McCarley, M. E. Shenton, M. Kubicki. 2012 « Anterior limb of the internal capsule in schizophrenia: A diffusion tensor tractography study ». Brain Imaging and Behavior vol. 6 , nº 3. p. 417-425
M. E. Shenton, H. M. Hamoda, J. S. Schneiderman, S. Bouix, O. Pasternak, Y. Rathi, M. A. Vu, M. P. Purohit, K. Helmer, I. Koerte, A. P. Lin, C. F. Westin, R. Kikinis, M. Kubicki, R. A. Stern, R. Zafonte. 2012 « A review of magnetic resonance imaging and diffusion tensor imaging findings in mild traumatic brain injury ». Brain Imaging and Behavior vol. 6 , nº 2. p. 137-192
A. Fedorov, X. Li, K. M. Pohl, S. Bouix, M. Styner, M. Addicott, C. Wyatt, J. B. Daunais, W. M. Wells, R. Kikinis. 2011 « Atlas-guided segmentation of vervet monkey brain MRI ». Open Neuroimaging Journal vol. 5 , nº suppl. 2. p. 186-197
M. Kubicki, J. L. Alvarado, C. F. Westin, D. F. Tate, D. Markant, D. P. Terry, T. J. Whitford, J. De Siebenthal, S. Bouix, R. W. McCarley, R. Kikinis, M. E. Shenton. 2011 « Stochastic tractography study of Inferior Frontal Gyrus anatomical connectivity in schizophrenia ». NeuroImage vol. 55 , nº 4. p. 1657-1664
Eric D. Melonakos, Martha E. Shenton, Yogesh Rathi, Douglas P. Terry, Sylvain Bouix, Marek Kubicki. 2011 « Voxel-based morphometry (VBM) studies in schizophrenia—can white matter changes be reliably detected with VBM? ». Psychiatry Research: Neuroimaging vol. 193 , nº 2. p. 65-70
Y. Rathi, M. Kubicki, S. Bouix, C. F. Westin, J. Goldstein, L. Seidman, R. Mesholam-Gately, R. W. McCarley, M. E. Shenton. 2011 « Statistical analysis of fiber bundles using multi-tensor tractography: Application to first-episode schizophrenia ». Magnetic Resonance Imaging vol. 29 , nº 4. p. 507-515
T. J. Whitford, D. H. Mathalon, M. E. Shenton, B. J. Roach, R. Bammer, R. A. Adcock, S. Bouix, M. Kubicki, J. De Siebenthal, A. C. Rausch, J. S. Schneiderman, J. M. Ford. 2011 « Electrophysiological and diffusion tensor imaging evidence of delayed corollary discharges in patients with schizophrenia ». Psychological Medicine vol. 41 , nº 5. p. 959-969
T. J. Whitford, P. Savadjiev, M. Kubicki, L. J. O'Donnell, D. P. Terry, S. Bouix, C. F. Westin, J. S. Schneiderman, L. Bobrow, A. C. Rausch, M. Niznikiewicz, P. G. Nestor, C. Pantelis, S. J. Wood, R. W. McCarley, M. E. Shenton. 2011 « Fiber geometry in the corpus callosum in schizophrenia: Evidence for transcallosal misconnection ». Schizophrenia Research vol. 132 , nº 1. p. 69-74
J. G. Malcolm, O. Michailovich, S. Bouix, C. F. Westin, M. E. Shenton, Y. Rathi. 2010 « A filtered approach to neural tractography using the Watson directional function ». Medical Image Analysis vol. 14 , nº 1. p. 58-69
Yogesh Rathi, James G. Malcolm, Oleg Michailovich, Carl-Fredrik Westin, Martha E. Shenton, Sylvain Bouix. 2010 « Tensor kernels for simultaneous fiber model estimation and tractography ». Magnetic Resonance in Medicine vol. 64 , nº 1. p. 138-148
Yogesh Rathi, James Malcolm, Sylvain Bouix, Allen Tannenbaum, Martha E. Shenton. 2010 « Affine registration of label maps in label space ». Journal of Computing vol. 2 , nº 4. p. 1-11
P. Savadjiev, G. L. Kindlmann, S. Bouix, M. E. Shenton, C. F. Westin. 2010 « Local white matter geometry from diffusion tensor gradients ». NeuroImage vol. 49 , nº 4. p. 3175-3186
A. N. Voineskos, N. J. Lobaugh, S. Bouix, T. K. Rajji, D. Miranda, J. L. Kennedy, B. H. Mulsant, B. G. Pollock, M. E. Shenton. 2010 « Diffusion tensor tractography findings in schizophrenia across the adult lifespan ». Brain vol. 133 , nº 5. p. 1494-1504
T. Kawashima, M. Nakamura, S. Bouix, M. Kubicki, D. F. Salisbury, C. F. Westin, R. W. McCarley, M. E. Shenton. 2009 « Uncinate fasciculus abnormalities in recent onset schizophrenia and affective psychosis: A diffusion tensor imaging study ». Schizophrenia Research vol. 110 , nº 1-3. p. 119-126
M. Kubicki, M. Niznikiewicz, E. Connor, L. Ungar, P. G. Nestor, S. Bouix, M. Dreusicke, R. Kikinis, R. W. McCarley, M. E. Shenton. 2009 « Relationship between white matter integrity, attention, and memory in schizophrenia: A diffusion tensor imaging study ». Brain Imaging and Behavior vol. 3 , nº 2. p. 191-201
K. Lee, T. Yoshida, M. Kubicki, S. Bouix, C. F. Westin, G. Kindlmann, M. Niznikiewicz, A. Cohen, R. W. McCarley, M. E. Shenton. 2009 « Increased diffusivity in superior temporal gyrus in patients with schizophrenia: A Diffusion Tensor Imaging study ». Schizophrenia Research vol. 108 , nº 1-3. p. 33-40
J. J. Levitt, M. Styner, M. Niethammer, S. Bouix, M. S. Koo, M. M. Voglmaier, C. C. Dickey, M. A. Niznikiewicz, R. Kikinis, R. W. McCarley, M. E. Shenton. 2009 « Shape abnormalities of caudate nucleus in schizotypal personality disorder ». Schizophrenia Research vol. 110 , nº 1-3. p. 127-139
J. S. Oh, M. Kubicki, G. Rosenberger, S. Bouix, J. J. Levitt, R. W. McCarley, C. F. Westin, M. E. Shenton. 2009 « Thalamo-frontal white matter alterations in chronic schizophrenia: A quantitative diffusion tractography study ». Human Brain Mapping vol. 30 , nº 11. p. 3812-3825
Yogesh Rathi, Oleg Michailovich, Martha E. Shenton, Sylvain Bouix. 2009 « Directional functions for orientation distribution estimation ». Medical Image Analysis vol. 13 , nº 3. p. 432-444
T. Yoshida, R. W. McCarley, M. Nakamura, K. Lee, M. S. Koo, S. Bouix, D. F. Salisbury, L. Morra, M. E. Shenton, M. A. Niznikiewicz. 2009 « A prospective longitudinal volumetric MRI study of superior temporal gyrus gray matter and amygdala-hippocampal complex in chronic schizophrenia ». Schizophrenia Research vol. 113 , nº 1. p. 84-94
M. Kubicki, M. Styner, S. Bouix, G. Gerig, D. Markant, K. Smith, R. Kikinis, R. W. McCarley, M. E. Shenton. 2008 « Reduced interhemispheric connectivity in schizophrenia-tractography based segmentation of the corpus callosum ». Schizophrenia Research vol. 106 , nº 2-3. p. 125-131
K. Siddiqi, J. Zhang, D. MacRini, A. Shokoufandeh, S. Bouix, S. Dickinson. 2008 « Retrieving articulated 3-D models using medial surfaces ». Machine Vision and Applications vol. 19 , nº 4. p. 261-275
S. Bouix, M. Martin-Fernandez, L. Ungar, M. Nakamura, M. S. Koo, R. W. McCarley, M. E. Shenton. 2007 « On evaluating brain tissue classifiers without a ground truth ». NeuroImage vol. 36 , nº 4. p. 1207-1224
M. Nakamura, D. F. Salisbury, Y. Hirayasu, S. Bouix, K. M. Pohl, T. Yoshida, M. S. Koo, M. E. Shenton, R. W. McCarley. 2007 « Neocortical gray matter volume in first-episode schizophrenia and first-episode affective psychosis: A cross-sectional and longitudinal MRI study ». Biological Psychiatry vol. 62 , nº 7. p. 773-783
K. M. Pohl, S. Bouix, M. Nakamura, T. Rohlfing, R. W. McCarley, R. Kikinis, W. E. L. Grimson, M. E. Shenton, W. M. Wells. 2007 « A hierarchical algorithm for MR brain image parcellation ». IEEE Transactions on Medical Imaging vol. 26 , nº 9. p. 1201-1212
K. M. Pohl, J. Fisher, S. Bouix, M. Shenton, R. W. McCarley, W. E. L. Grimson, R. Kikinis, W. M. Wells. 2007 « Using the logarithm of odds to define a vector space on probabilistic atlases ». Medical Image Analysis vol. 11 , nº 5. p. 465-477
H. Haidar, S. Bouix, J. J. Levitt, R. W. McCarley, M. E. Shenton, J. S. Soul. 2006 « Characterizing the shape of anatomical structures with poisson's equation ». IEEE Transactions on Medical Imaging vol. 25 , nº 10. p. 1249-1257
M. S. Koo, C. C. Dickey, H. J. Park, M. Kubicki, Y. J. Na, S. Bouix, K. M. Pohl, J. J. Levitt, M. Nakamura, M. E. Shenton, R. W. McCarley. 2006 « Smaller neocortical gray matter and larger sulcal cerebrospinal fluid volumes in neuroleptic-naive women with schizotypal personality disorder ». Archives of General Psychiatry vol. 63 , nº 10. p. 1090-1100
Sylvain Bouix, Jens C. Pruessner, D. Louis Collins, Kaleem Siddiqi. 2005 « Hippocampal shape analysis using medial surfaces ». NeuroImage vol. 25 , nº 4. p. 1077-1089
Sylvain Bouix, Kaleem Siddiqi, Allen Tannenbaum. 2005 « Flux driven automatic centerline extraction ». Medical Image Analysis vol. 9 , nº 3. p. 209-221
L. C. Wiegand, S. K. Warfield, J. J. Levitt, Y. Hirayasu, D. F. Salisbury, S. Heckers, S. Bouix, D. Schwartz, M. Spencer, C. C. Dickey, R. Kikinis, F. A. Jolesz, R. W. McCarley, M. E. Shenton. 2005 « An in vivo MRI study of prefrontal cortical complexity in first-episode psychosis ». American Journal of Psychiatry vol. 162 , nº 1. p. 65-70
Kaleem Siddiqi, Sylvain Bouix, Allen Tannenbaum, Steven W. Zucker. 2002 « Hamilton-Jacobi skeletons ». International Journal of Computer Vision vol. 48 , nº 3. p. 215-231
John M. Gauch, Susan Gauch, Sylvain Bouix, Xiaolan Zhu. 1999 « Real time video scene detection and classification ». Information Processing and Management vol. 35 , nº 3. p. 381-400

Kaleem Siddiqi, Sylvain Bouix, Jayant Shah. 2008 « Skeletons via shocks of boundary evolution ».
Sylvain Bouix, Kaleem Siddiqi, Allen Tannenbaum, Steven W. Zucker. 2006 « Medial axis computation and evolution ».
Daniel Goldberg-Zimring, Dominik S. Meier, Sylvain Bouix, Simon K. Warfield. 2005 « Studying anatomy and disease in medical images using shape analysis ».

Guillermo Gallardo, Gaston Zanitti, Alfred Anwander, Matthew Higger, Sylvain Bouix, Samuel Deslauriers-Gauthier, Demian Wassermann. 2020 « Lesion-robust white-matter bundle identification through diffusion driven label fusion ». Communication lors de la conférence : 28th International Society for Magnetic Resonance in Medicine Annual Meeting & Exhibition (ISMRM 2020) (Virtual, Aug. 08-14, 2020)